Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908438.1_cds_XP_016458566.1_52180
CDS Infomation

[gene=LOC107782219] [db_xref=GeneID:107782219] [protein=BAG-associated GRAM protein 1-like isoform X4] [protein_id=XP_016458566.1] [location=complement(join(11439..11639,11729..11790,12855..12918,13044..13097,13175..13321,13672..13776,13857..14000,15147..15253,15833..15932,16046..16075,25537..25653,25764..25881,26902..26948,27061..27189,27370..27441))] [gbkey=CDS]
Sequence

ATGGTTCCTGGTTCAAGAAATCCTATGTGGGGGGAGGAGTTCAACTTCTCTGTTGACGAG
CTTCCAGTAGAGATTAATGTGACAATATATGATTGGGATATAATTTGGAAAAGTGCTGTT
CTTGGTTCAGTGACTGTAGCTGTTGAAAATGAAGGTCAAACTGGTGCAGAATGGCATACA
TTAGACAGTTCATCTGGGCAGGTTTATCTTCATATTAATACTTTAAAGCACAATGTCAAT
TTTTCAAGAGGTTTGAACGGCCATGCTAATACTCGTAGAAGGATTGATTTGGATAAACAA
GGACCAACTGTTGTTCATCAGAAACCTGGGCTGCTGCAAACAATATTTGATCTCCCTGCT
GATGAGGTTGTCGAACATAGTTATTCATGTGCTCTAGAAAGGTCATTCTTGTATCATGGC
CGTATGTATGTTTCGACATGGCATATCTGCTTCCACTCAAACGTATTCTCAAAGCAAATG
AAGGTAATTATTCCTTTAGCGGAAATAGATGAGATAAGGAGGAGCCAGCATGCATTTGTT
AATCCTGCTATTACAGTAATTCTCCGCATTGGTGCTGGCGGCCATGGGGTGCCTCCGTTA
GGAAATCCGGATGGTAGAGTAAGATATAAATTCGCATCTTTTTGGAATAGGAATCATGCG
TTAAGAGCCTTGCAACGTTCAGCAGATAACTATCATGAAATGCTAGAAGCTGAGAAGAAG
GAGATGGAACAGTCGGCACTGCGTGCACATAGCAGCTCGGTCAAAGGATGTAAAAAGATG
GAATTAAATCAGGAAGAAAGTGTGACCAAGATTCAGAAATGTCAACCATTTATTAAAGAA
GAAGTCCTCTCTGGTATATATGATGATGTTTTGCCATGCACAGCCGAGCAATTTTTTGAC
TTGCTATTGGCTGATGGTTCAAATTTCACTAATGAATACCGTGCAGCAGGGAAAGATTTC
AATCTCAATATGGGTGAATGGAATTCTGCTGATGAATATGATGGTCAAATCAGAGAAATT
ACTTTCAGAACCATATGTAACAGCCCTATGTGCCCTCCAGATACAGCAGTGACAGAGTAT
CAACATGCTGTTTTATCACTGGATAAAAAAGCTCTTGTATTTGAGACTGTGCAACAGGCC
CATGATGTGCCGTTTGGGTCATGCTTTGAGGTACACTGTAGGTGGTCGTTGGAAACAACT
TCTGAATCATCCTGCACTTTGGACATAAAAGCCGGTGCACATTTCAAGAAATGGTGCATT
ATGCAGTCTAAAATTAAGTCAGGAGCTATTAACGAGTACAAGAAAGAGATGGCAATAATG
TTGGAGGTGGCTCATTCATTGGTTAAACCAAGAGTATCAGTGAGCGAAATAGAAAATGTC
AAACCAAGAGAATCAGTGAGTGAAATAGAAAATATCATCTCCACAACACAATCCTTGTAT
CAACATTGTAACCTATCTCCACCAAGGAGATCCAATGTCCGTCTTTGTAATACGTGA

Peptide Sequence

PEP ID

XP_016458566.1
PEP Infomation

PREDICTED: BAG-associated GRAM protein 1-like isoform X4 [Nicotiana tabacum]
Sequence

MVPGSRNPMWGEEFNFSVDELPVEINVTIYDWDIIWKSAVLGSVTVAVENEGQTGAEWHT
LDSSSGQVYLHINTLKHNVNFSRGLNGHANTRRRIDLDKQGPTVVHQKPGLLQTIFDLPA
DEVVEHSYSCALERSFLYHGRMYVSTWHICFHSNVFSKQMKVIIPLAEIDEIRRSQHAFV
NPAITVILRIGAGGHGVPPLGNPDGRVRYKFASFWNRNHALRALQRSADNYHEMLEAEKK
EMEQSALRAHSSSVKGCKKMELNQEESVTKIQKCQPFIKEEVLSGIYDDVLPCTAEQFFD
LLLADGSNFTNEYRAAGKDFNLNMGEWNSADEYDGQIREITFRTICNSPMCPPDTAVTEY
QHAVLSLDKKALVFETVQQAHDVPFGSCFEVHCRWSLETTSESSCTLDIKAGAHFKKWCI
MQSKIKSGAINEYKKEMAIMLEVAHSLVKPRVSVSEIENVKPRESVSEIENIISTTQSLY
QHCNLSPPRRSNVRLCNT

Transcript Sequence

Gene sequence data has not been registered.